wungchow said:the two methyl groups on the side chain, when it is long, probably helps twist it into the correct conformation in the lipid membrane (which is its binding domain)
NCC's like CP 55940 are bound to one of the extracellular helices with hydrogen bonding from the norther OH playing a part, certainly mutation studies seem to indicate this is the case. There is also strong evidence that the non-classical bicyclic cannabinoids and the benzopyran classical cannabinoids bind in different locations with CP55940 binding to a mostly extracellular area of the receptor, but have somewhat overlapping binding sites with the benzopyran CBs. the WIN 55212 site is further in and I expect it does not require hydrogen bonding. mix n match SAR from bicyclic NCC's to benzopyran cannabinoids doesn't always hold true.
there are some good (free) papers at Kennisaw state University.. not going to link from here.
The whole thing is finally getting interesting with a huge amount of research going the field, CB1 agonists with limited CNS penetration, non competitive antagonists, inverse agonists, etc etc.
Some of the more potent cannabinoids especially some of Mechoulam's HU series also act as NMDA antagonists, the neuro protective and promoting effects of HU 211 perhaps rely more on NMDA antagonism than its CB activity.
At some point I must get a copy of Roger Pertwee's book 'the cannabinoids'
nolandin ether is very interesting, does anyone know if it requires a FAAH inhibitor to make it active in vivo?... FAAH inhibitors look a bit non selective and scary. Especially as lots have alkylating groups on them which is how they work. I think a couple of related compounds are used in industry as high pressure lubricants or something similar.
There appears to be a bit of a mess with defining things as partial agonists or full agonists at CB1 or CB2, what do you measure? some use the effect on potassium channels, or cAMP, or inhibition of mouse vas deferns contraction, often they define the most common CB agonist CP 55940 as a full agonist and go from there even though it may not be a full agonist either (there are other things with higher intrinsic activity than 55940 fuller than full almost). so it is rather difficult to compare results across different studies. so far it seems that HU 210 is the most potent substance both in terms of how well it binds to CB1 and CB2 and also has very high activity as an agonist.
Perhaps the ratio between relative CB1 CB2 agonism is the most useful indication for THC like effects but also the hardest to determine?
