aced126
Bluelighter
- Joined
- May 18, 2015
- Messages
- 1,047
I'm still not satisfied with how one para fluorine substitution can trigger such a big change in selectivity for 5HT release over amphetamine which is very much selective towards dopamine and norepinephrine release. Hydrogen bonding in halogens is very weak, and a fluorine on an aromatic is very slightly more hydrophilic than the hydrogen couterpart. The radii of both atoms are very similar instead.
I'm now starting to think that there is something more to just binding in explaining the changed selectivity in this compound. Any new readers to this thread can refer back to this (http://www.bluelight.org/vb/threads...And-methamphetamine-only-releases-1-10-of-5HT) which contains much more information about binding at SERT.
Could anyone hazard a guess as to other factors playing a part in the selectivity of this molecule. Both activated and deactivated rings can bind to SERT, so that rules out the effect of fluorine on the ring. Fluorine is a weak hydrogen bond acceptor ruling out the theory of a possible hydrogen bond. The radius of fluorine is very similar to hydrogen so steric clash is unlikely.
I'm now starting to think that there is an endogenous mechanism by which phenethylamine is able to work in a similar way to amphetamine (it is the body's natural amphetamine you could say; a massive surge of it is released when doing high intensity excercise). However there is another problem. Phenethylamine is only present in the cytosol of neurons mostly and both dopaminergic and serotonergic vesicles will be very close to identical. VMAT2 and TAAR1 has the identical protein structure in both neurons. There is no phenethylamine in the serotonergic neuron (I think), and so 4-FA has to be getting into the serotonergic neuron to facilitate its effects. Amphetamine does not have these effects.
Thus the only way 4-FA can do what it does is by getting into the 5HT neuron way better than amphetamine does. Am I missing a really obvious binding interaction. Fluorines are often substituted onto compouds to tinker with the compounds metabolism while retaining target efficacy.
TLDR; I think there is a possible logical biological explanation for this observation rather than a purely molecular approach.
I'm now starting to think that there is something more to just binding in explaining the changed selectivity in this compound. Any new readers to this thread can refer back to this (http://www.bluelight.org/vb/threads...And-methamphetamine-only-releases-1-10-of-5HT) which contains much more information about binding at SERT.
Could anyone hazard a guess as to other factors playing a part in the selectivity of this molecule. Both activated and deactivated rings can bind to SERT, so that rules out the effect of fluorine on the ring. Fluorine is a weak hydrogen bond acceptor ruling out the theory of a possible hydrogen bond. The radius of fluorine is very similar to hydrogen so steric clash is unlikely.
I'm now starting to think that there is an endogenous mechanism by which phenethylamine is able to work in a similar way to amphetamine (it is the body's natural amphetamine you could say; a massive surge of it is released when doing high intensity excercise). However there is another problem. Phenethylamine is only present in the cytosol of neurons mostly and both dopaminergic and serotonergic vesicles will be very close to identical. VMAT2 and TAAR1 has the identical protein structure in both neurons. There is no phenethylamine in the serotonergic neuron (I think), and so 4-FA has to be getting into the serotonergic neuron to facilitate its effects. Amphetamine does not have these effects.
Thus the only way 4-FA can do what it does is by getting into the 5HT neuron way better than amphetamine does. Am I missing a really obvious binding interaction. Fluorines are often substituted onto compouds to tinker with the compounds metabolism while retaining target efficacy.
TLDR; I think there is a possible logical biological explanation for this observation rather than a purely molecular approach.